HLA
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HLA21


CODE
PROBE
ACC.N
MAP
UCSC May 2004
REMARKS
B-A





HyA inversion
20B
RP11-477J8 BES 20p12.3 chr20:5,318,826-5,475,288 HLA21p&21q
RP11-684P7 BES 20p12.3 chr20:5,343,692-5,528,006
20C
RP5-1068F16 AL023913 20p12.3 chr20:10,155,017-10,295,322

RP11-432M9 BES 20p12.3 chr20:12,620,845-12,811,812
20D
RP11-634F24 BES 20p12.1 chr20:16,526,580-16,713,480
20E
RP5-966J20 AL121925 20p11.21 chr20:24,698,120-24,737,379

CENTROMERE




B-A





HyA inversion
20B
RP11-684P7 BES 20p12.3 chr20:5,343,692-5,528,006 HLA21p&21q
RP11-477J8 BES 20p12.3 chr20:5,318,826-5,475,288

RP5-1187M17 AL121891 20p13 chr20:3,013,541-3,139,396
20A
RP11-91I9 BES 20p13 chr20:2,990,246-3,155,302
B-H






20F
RP11-166F17 BES 20q11.21 chr20:30,113,914-30,276,465
20G
RP5-906C1 AL133342 20q13.13 chr20:46,828,731-46,939,544
20H
RP11-46O3 BES 20q13.31 chr20:54,786,446-54,948,822
20I
RP11-476I15 BES 20q13.33 chr20:62,391,984-62,394,795

Legend. HLA ideogram (left) showing the synteny block correspondence with the human chromosome(s) (right). Internal red numbers indicate the human corresponding chromosome. Blue and red arrows indicate concordant (blue) and inverse (red) sequence polarity (orientation) with respect to humans. Black numbers (chromosome) followed by a letter (BAC), on the right, indicate specific BACs as reported in the Supplemental Table S1.

B-H Breaks in lineages leading to HSA
B-L Breaks in lineages leading to Lar
HyA: Hylobatidae ancestor
B-A Breaks in hylobatidae ancestor
B-N Breaks in lineages leading to Nomascus
Splitting clones

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