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HLA6


CODE
PROBE
ACC.N
MAP
UCSC May 2004
REMARKS
5J RP11-298C7 BES 5q35.2 chr5:176,032,557-176,197,535

RP11-461O14 BES 5q31.2 chr5:137,734,106-137,920,380
5I RP11-42G6 BES 5q31.1 chr5:132,428,789-132,612,983 HLA6p&6q
B-A NLE CH271-362E7 BES
chr5:132,657,567/chr16:73,379,645 HyA inversion HLA6p
CH271-118H24 BES
chr5:132,634,116/chr16:73,379,685
CH271-301L21 BES
chr5:132,513,234/chr16:73,250,285
16H
RP11-1005B19
BES
16q22.3
chr16:73,373,593-73,547,169
HLA6p&6q
16G RP11-620P11 BES 16q22.1 chr16:65,562,665-65,775,612
16F RP11-406F21 AZ081979 16q13 chr16:56,002,259-56,156,743
16E
RP11-303G21
BES
16q12.1
chr16:46,996,157-47,145,251


CENTROMERE



16D RP11-360L15 RH76376 16p12.1 chr16:28,873,631-28,873,841

RP11-313D3 BES 16p12.3 chr16:19,391,011-19,589,554
16C RP11-467J24
16p12.3 chr16:19,290,201-19,451,651 HLA6q&8p
B-A NLE CH271-127C4 BES
chr16:19,508,054/chr5:75,710,428 HyA translocation HLA6q
CH271-68P17 BES
chr16:19,481,876/chr5:75,741,326
5H RP11-204O23 BES 5q13.3 chr5:75,668,456-75,845,041 HLA6q&8p

RP11-585P7 BES 5q14.1 chr5:80,323,475-80,476,609

RP11-585P7 BES 5q14.1 chr5:80,323,475-80,476,609

RP11-81C5 BES 5q22.3 chr5:115,183,046-115,366,698

RP11-480B13
BES
5q23.3
chr5:128,163,020-128,349,526


RP11-485M7
BES
5q31.1
chr5:132,316,850-132,478,768

5I RP11-42G6 BES 5q31.1 chr5:132,428,789-132,612,983 HLA6p&6q
B-A





HyA inversion
16H
RP11-1005B19
BES
16q22.3
chr16:73,373,593-73,547,169
HLA6p&6q
16I
RP11-457K7
BES
16q23.3
chr16:82,645,203-82,699,735

Legend. HLA ideogram (left) showing the synteny block correspondence with the human chromosome(s) (right). Internal red numbers indicate the human corresponding chromosome. Blue and red arrows indicate concordant (blue) and inverse (red) sequence polarity (orientation) with respect to humans. Black numbers (chromosome) followed by a letter (BAC), on the right, indicate specific BACs as reported in the Supplemental Table S1.

B-H Breaks in lineages leading to HSA
B-L Breaks in lineages leading to Lar
HyA: Hylobatidae ancestor
B-A Breaks in hylobatidae ancestor
B-N Breaks in lineages leading to Nomascus
Splitting clones

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