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HLA10


CODE
PROBE
ACC.N
MAP
UCSC May 2004
REMARKS
2A
RP11-1N7 AC104684 2p25.3 chr2:51,060-180,829
2B
RP11-527P23 AC104080 2p24.1 chr2:22,811,280-22,994,946
2C
RP11-158I13 AC074091 2p23.3 chr2:27,710,598-27,914,750
B-N
NLE
CH271-32K04 BES chr2:27,705,953/chr17:59,288,449 HLA10p&8q
2D
RP11-702B22 BES 2p22.3 chr2:33,764,070-33,955,033 ms in HSA
B-L




HLA translocation
19J
RP11-22H18
19p13.31 chr19:49,372,243-49,525,206 10p&16q

RP11-299J11
19p13.3 chr19:44,165,125-44,364,684
B-N
NLE
CH271-119L23

chr19:44,062,149/chr7:22,955,431 HLA10p&1q
19I
RP11-447A19 BES 19q13.2 chr19:43,938,883-44,121,289
19H
RP11-150D11
19q13.12 chr19:42,217,128-42,374,421
B-A





HyA translocation
12I
RP11-680F18 BES 12q chr12:63,441,896-63,614,208 HLA10q&4pcen
12H
RP11-92K9 BES 12q chr12:51,431,925-51,601,964

CENTROMERE




12E
RP11-503D9 BES 12q12 chr12:38,873,660-38,873,902

RP11-618L22 AC079906 12q13.1 chr12:45,523,760-45,704,447
12F
RP11-23J18 BES 12q13.1 chr12:45,755,429-45,925,226 HLA10q&12qter
B-A





HyA translocation
3P
RP11-875E8 BES 3q24 chr3:147,570,413-147,758,375
3Q
RP11-142B1 BES 3q26.1 chr3:162,044,666-162,223,495
3R
RP11-313F11 AC016953 3q29 chr3:197,210,940-197,374,610

Legend. HLA ideogram (left) showing the synteny block correspondence with the human chromosome(s) (right). Internal red numbers indicate the human corresponding chromosome. Blue and red arrows indicate concordant (blue) and inverse (red) sequence polarity (orientation) with respect to humans. Black numbers (chromosome) followed by a letter (BAC), on the right, indicate specific BACs as reported in the Supplemental Table S1.

B-H Breaks in lineages leading to HSA
B-L Breaks in lineages leading to Lar
HyA: Hylobatidae ancestor
B-A Breaks in hylobatidae ancestor
B-N Breaks in lineages leading to Nomascus
Splitting clones

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