HLA
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HLA9


CODE
PROBE
ACC.N
MAP
UCSC May 2004
REMARKS
1A
RP11-421C4 AC026283 1p36.33 chr1_random:195,187-392,934

RP11-348M21 BES 1p36.31 chr1:7,000,925-7,591,627
1B
RP11-265F14 AL512883 1p36.13 chr1:15,503,412-15,607,725
1M
RP11-35B4
1p35.3 chr1:16,624,672-16,667,892 HLA7q&crosshyb&5&9
1C
RP11-343P8 BES 1p35.2 chr1:29,892,430-30,059,076
B-A




HyA fission
B-L




HLA fusion
B-A




HyA inversion&fission
8H
RP11-142A23 BES 8q13.3 chr8:73,126,760-73,283,150

RP11-382J12 AC022731 8q13.3 chr8:71,614,507-71,778,503
8G
RP11-265J24 AC087358 8q12.3 chr8:62,733,633-62,913,037

NLE
CH271-471M19 BES
chr8:62,679,133/chr8:99,140,304 HLA9p
B-N
NLE
CH271-341G21 BES
chr8:62,717,602/chr8:99,170,915 HLA9p&9q
CH271-309J17 BES
chr8:62,746,792-chr8:99,227,403
CH271-209D9 BES
chr8:62,833,833/chr8:99,298,482

RP11-11C20 AC090186 8q11.22 chr8:52,776,787-52,920,537
8F
RP11-1134I14 BES 8q11.1 chr8:48,063,873-48,241,291

CENTROMERE




B-A




HyA inversion&fission
8I
RP11-232D14 BES 8q13.3 chr8:73,793,280-73,983,779
8J
RP11-91P17 AC084706 8q21.12 chr8:79,158,450-79,305,261

RP11-353O11 AC091184 8q21.3 chr8:90,077,451-90,220,326
8K
RP11-640O15
8q21.12 chr8:99,070,433-99,228,183
B-N
NLE
CH271-341G21 BES
chr8:62,717,602/chr8:99,170,915 HLA9p&9q
CH271-309J17 BES
chr8:62,746,792-chr8:99,227,403
CH271-209D9 BES
chr8:62,833,833/chr8:99,298,482
8L
RP11-697C18 AC024996 8q23.3 chr8:113,395,877-113,573,740
8M
RP11-414D17 AC013545 8q24.12 chr8:122,296,267-122,496,452
8
RP11-269I24 AC090987 8q24.22 chr8:131,641,435-131,795,238
8N
RP11-349C2 AC022505 8q24.3 chr8:145,585,591-145,778,719

Legend. HLA ideogram (left) showing the synteny block correspondence with the human chromosome(s) (right). Internal red numbers indicate the human corresponding chromosome. Blue and red arrows indicate concordant (blue) and inverse (red) sequence polarity (orientation) with respect to humans. Black numbers (chromosome) followed by a letter (BAC), on the right, indicate specific BACs as reported in the Supplemental Table S1.

B-H Breaks in lineages leading to HSA
B-L Breaks in lineages leading to Lar
HyA: Hylobatidae ancestor
B-A Breaks in hylobatidae ancestor
B-N Breaks in lineages leading to Nomascus
Splitting clones

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