HLA-16

HLA

HLA16

	CODE	PROBE	ACC.N	MAP	UCSC May 2004	REMARKS
B-L						HLA translocation
	17P	RP11-666A8	AC015802	17q25.1	chr17:71,921,323-72,127,076
B-A						HyA inversion
	17Q	RP11-1033I8	BES	17q25.3	chr17:77,586,262-77,802,604
B-N	NLE	CH271-127K22	BES		chr17:77,802,324/chr2:99,469,092	HLA16p&16p
	17O	RP11-647F2	AC103809	17q25.1	chr17:69,679,276-69,878,103	HLA16p&crosshyb
B-A						HyA inversion
		RP11-300G13	BES	17q24.3	chr17:65,539,247-65,725,860
		RP11-481P7	BES	17q24.2	chr17:62,182,470-62,330,115
	17N	RP11-346K10	BES	17q24.1	chr17:61,533,516-61,702,132	HLA16p &8q HLA16p&16q
B-A	NLE	CH271-156E13	BES		chr17:61,651,062-chr2:73,661,408	HLA translocation HLA16p
B-A	NLE	CH271-219C13	BES		chr17:61,672,774-chr2:73,672,665	HLA translocation HLA16p
	2I	RP11-582H21	AC074008	2p13.2	chr2:73,469,289-73,628,727	HLA16p&16q
		RP11-495B16	AC109638	2p12	chr2:82,669,826-82,774,612
	2J	RP11-554H10	AC012671	2p11.2	chr2:88,432,100-88,630,793
B-H
	2M	RP11-67L14	AC079753	2q13	chr2:113,258,399-113,412,612
		RP11-907H10	BES	2q13	chr2:112,919,644-113,117,886
		RP11-519H15	AC005040	2q12.3	chr2:106,939,422-107,129,370
B-N	NLE	CH271-127K22	BES		chr2:99,469,092-chr17:77,802,324	HLA16p&16p
	2L	RP11-111H13	BES	2q11.2	chr2:99,271,614-99,450,504
	2K	RP11-468G5	AC009238	2q11.1	chr2:95,325,519-95,527,879
		CENTROMERE
	17E	RP11-195H9	BES	17p11.2	chr17:18,246,554-18,445,952
		RP11-958E14	BES	17p11.2	chr17:17,586,396-17,798,015
	17C	RP11-92B11		17q25.1	chr17:16,467,786-16,646,713	HLA16q &8q
B-A						HyA inversion
	2I	RP11-582H21	AC074008	2p13.1	chr2:73,469,289-73,628,727	HLA16q&16p
		RP11-1115A12	BES	2p14	chr2:64,940,189-65,080,881
	2H	RP11-511I11	AC009501	2p15	chr2:63,142,442-63,299,614
		RP11-1114A19	BES	2p16.2	chr2:54,612,178-54,738,558
	2G	RP11-133M22	BES	2p21	chr2:47,437,263-47,599,117
	2F	RP11-339H12	AC010883	2p21	chr2:43,250,442-43,465,973
	2E	RP11-366P6	BES	2p22.3	chr2:33,921,612-34,093,881
B-L						HLA translocation
	19J	RP11-22H18		19q13.31	chr19:49,372,243-49,525,206	HLA16q&10p
		RP11-77I7		19q13.32	chr19:50,999,952-51,169,950
	19K	RP11-194H9	BES	19q13.32	chr19:51,551,265-51,719,089
B-A						HyA inversion
	19B	RP11-137E22	BES	19p13.3	chr19:5,663,924-5,851,279
	19A	RP11-75H6	BES	19p13.3	chr19:902,641-1,095,485

Legend. HLA ideogram (left) showing the synteny block correspondence with the human chromosome(s) (right). Internal red numbers indicate the human corresponding chromosome. Blue and red arrows indicate concordant (blue) and inverse (red) sequence polarity (orientation) with respect to humans. Black numbers (chromosome) followed by a letter (BAC), on the right, indicate specific BACs as reported in the Supplemental Table S1.

B-H Breaks in lineages leading to HSA	B-L Breaks in lineages leading to Lar	HyA: Hylobatidae ancestor
B-A Breaks in hylobatidae ancestor	B-N Breaks in lineages leading to Nomascus	Splitting clones

home