HLA
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HLA11


CODE
PROBE
ACC.N
MAP
UCSC May 2004
REMARKS


Relic of Hominoidea centromere?


11R
RP11-90A13 BES 11q25 chr11:130,889,653-131,037,422
11Q RP11-276O11 BES 11q22.3 chr11:105,262,408-105,262,775

RP11-975P12 BES 11q22.3 chr11:90,083,760-90,253,816
11P RP11-692G6 BES 11q14.3 chr11:89,719,943-89,890,899

CENTROMERE



Neocentromere
11O RP11-529A4 AP004607 11q14.3 chr11:89,286,313-89,446,995

RP11-119M23 BES 11q14.2 chr11:85,346,396-85,346,523
11N RP11-7H7 BES 11q14.1 chr11:78,034,239-78,206,818
11M RP11-757C15 AP000719 11q13.4 chr11:71,236,122-71,432,551
B-H






11E RP11-676K24 BES 11p15.4 chr11:3,827,640-4,009,556
11F RP11-841P9 BES 11p15.4 chr11:9,825,493-10,001,348
11G RP11-310N21 BES 11p15.2 chr11:13,468,054-13,634,268
11H RP11-56J22 BES 11p15.1 chr11:20,180,423-20,332,556
11I RP11-103P20 BES 11p13 chr11:36,021,056-36,180,792

RP11-150D18 BES 11p15.1 chr11:41,858,281-42,020,207

RP11-390K5 AC024045.4 11p11.2 chr11:47,087,663-47,277,575
11J RP11-318N19 FPP 11p11.2 chr11:48,092,602 -48,282,603
B-A





HyA translocation

Legend. HLA ideogram (left) showing the synteny block correspondence with the human chromosome(s) (right). Internal red numbers indicate the human corresponding chromosome. Blue and red arrows indicate concordant (blue) and inverse (red) sequence polarity (orientation) with respect to humans. Black numbers (chromosome) followed by a letter (BAC), on the right, indicate specific BACs as reported in the Supplemental Table S1.

B-H Breaks in lineages leading to HSA
B-L Breaks in lineages leading to Lar
 HyA: Hylobatidae ancestor
B-A Breaks in hylobatidae ancestor
B-N Breaks in lineages leading to Nomascus
Splitting clones

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