MMU
1
2
3
4
5
6
7
8
9

MMU1 - HSA1      The MMU1 centromere is a neocentromere

BAC Accession # map
UCSC March 2006
comments
-
5B
RP11-438F14 AC098483 1q44 chr1:246,754,133-246,932,000
-
5
RP11-385F5 AL359921 1q43 chr1:234,752,824-234,966,581
-
5
RP11-3K22 AL359874 1q42.13 chr1:227,082,837-227,162,782
-
5A
RP4-621O15 AL713899 1q42.13 chr1:226,810,735-226,866,653 splits
CH250-471F6 signals on HSA at ~161/~226Mb; dup on MMU
4A
RP11-331H2 AL392003 1q23.3 chr1:161,033,866-161,225,664 overlaps 3B
4
RP11-332H17 AL356475 1q24.2 chr1:168,242,366-168,350,412
4
RP11-152A16 BES 1q25.2 chr1:177,339,824-177,521,905
4
RP11-134C1 BES 1q31.1 chr1:186,252,053-186,417,889
4
RP11-553K8 AL157402 1q31.3 chr1:196,750,597-196,960,927
4
RP11-57I17 AL137789 1q32.2 chr1:205,811,787-205,957,118
4
RP11-123O6 BES 1q32.2 chr1:209,402,692-209,548,350
4
RP11-74E6 BES 1q41 chr1:212,560,677-212,729,794
4
RP11-324K19 AC118468 1q41 chr1:219,203,440-219,218,989
4B
RP4-621O15 AL713899 1q42.13 chr1:226,810,735-226,866,653 splits
MMU cen (neocentromere)
-
3B
RP11-572K18 AL445197 1q23.3 chr1:160,918,751-161,035,790 overlaps 4A
-
3
RP11-8D14 AC068728 1q23.3 chr1:158,924,552-159,088,467
-
3
RP11-98F1 AL353760 1q22 chr1:153,539,660-153,543,654
-
3
RP11-458I7 fishClone 1q21.2 chr1:148,238,619-148,426,829
-
3
RP11-353N4 fishClone 1q21.1-2 chr1:147,853,299-147,978,467 dup on HSA
- 3A RP11-14N7 AL513526 1q21.1 chr1:147,156,861-147,214,458 dup on HSA
2A RP11-453B6 BX248407 1p11.1–11.2 chr1:121,045,874-121,186,957 dup on HSA; no signal on MMU
2
HSA cen (inactivated, ancestral to MMU)*
2
RP11-35B4 AL359093 1q21.1+1p11+1p36 chr1:144,000,592-144,166,607
2 RP11-30I17 BES 1q21.1 chr1:144,174,052-144,361,891
2 RP11-314N2 AL445591 1q21.1 chr1:145,732,430-145,872,521 dup on HSA; dup on MMU
2B RP11-763B22 AL592492 1q21.1 chr1:147,000,772-147,158,860 dup on HSA; dup on MMU
- 1B RP11-439A17 fishClone 1p11.2 chr1:120,548,680-120,738,218
-
1
RP5-1042I8 AL359752 1p11.2-12 chr1:120,134,618-120,272,572
-
1
RP11-192J8 BES 1p12 chr1:118,169,383-118,169,829
-
1
RP11-284N8 AL365361 1p13.3 chr1:110,897,276-111,090,458
-
1
RP11-138K16 AC093559 1p21.2 chr1:99,728,340-99,904,318
-
1
RP11-324C23 AL445992 1p22.1 chr1:91,951,846-91,986,170
-
1
RP11-302M6 AL391497 1p22.2 chr1:90,062,248-90,252,009
-
1
RP11-254E16 BES 1p31.1 chr1:84,539,796-84,689,450
-
1
RP11-316C12 AL627317 1p31.1 chr1:71,621,580-71,715,216
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1
RP11-195G13 BES 1p32.3 chr1:54,100,318-54,292,540
-
1
RP5-1154B21 (D1S3315) 1p33 chr1:47,605,724-47,806,009
-
1
RP11-266K22 AL451070 1p35.2 chr1:31,512,242-31,645,345
-
1
RP11-265F14 AL512883 1p32.21 chr1:15,630,693-15,735,006
-
1A
RP11-421C4 BES 1p36.33 chr1:1,247,484-1,432,829

* A human-specific pericentric inversion is present on this chromosome, but it involves
only pericentromeric duplications (Szamalek et al. Hum. Genet. 120:126-138, 2006)