|
|
sequence orientation with respect to HSA |
|
|
centromere |
|
|
neocentromere |
|
|
sinteny breaks occurred in the vervet lineage |
|
|
sinteny breaks occurred in the human lineage |
|
|
duplicated BAC clones |
|
| |
HSA chr |
clone |
Acc.N. |
UCSC Feb. 2009 (hg19)
|
map |
note |
| |
- |
|
|
|
|
|
 |
3c |
RP11-930L21 |
BES |
chr3:39,308,070-39,498,626
|
3p22.2 |
|
|
3c |
RP11-343C3 |
BES |
chr3:39,166,620-39,340,908
|
|
|
|
3c |
RP11-159A17 |
BES |
chr3:38,953,111-39,113,247
|
|
|
|
3c |
RP11-90H23 |
BES |
chr3:38,385,373-38,565,539
|
|
|
|
3c |
RP11-236P3 |
AC087683 |
chr3:36,628,471-36,820,759
|
3p22.2 |
|
|
- |
|
|
|
|
OWM inv |
|
3g |
RP11-177B11 |
BES |
chr3:186,337,181-186,516,003
|
3q27.3 |
|
|
3g |
RP11-157K18 |
BES |
chr3:185,976,914-186,149,955
|
|
|
|
3g |
RP11-245C23 |
FISH |
chr3:178,830,412-179,014,819
|
|
|
|
3g |
RP11-33A1 |
BES |
chr3:177,347,718-177,532,125
|
|
|
|
3g |
RP11-281P20 |
BES |
chr3:166,759,460-166,917,041
|
|
|
|
3g |
RP11-418B12 |
BES |
chr3:163,057,027-163,224,433
|
3q26.1 |
|
|
 |
neocentromere shared with all OWM species
|
|
|
3g |
RP11-1089F10 |
BES |
chr3:162,738,308-162,905,830
|
3q26.1 |
|
|
3g |
RP11-885D13 |
BES |
chr3:154,412,458-154,559,194
|
|
|
|
3g |
RP11-220J13 |
FISH |
chr3:136,799,822-136,965,535
|
|
|
|
3g |
RP11-893G19 |
BES |
chr3:129,979,893-130,163,920
|
3q22.1 |
|
|
-
|
|
|
|
|
HSA inv (see Fig. below) |
 |
3b |
RP11-279L16 |
AC069521 |
chr3:15,099,735-15,415,431
|
3p24.3 |
|
|
3b |
RP11-79E6 |
BES |
chr3:20,421,810-20,600,545
|
|
|
|
3b |
RP11-109D5 |
BES |
chr3:25,522,572-25,722,386
|
|
|
|
3b |
RP11-246K9 |
BES |
chr3:33,005,611-33,175,491
|
|
|
|
3b |
RP11-607P24 |
BES |
chr3:36,323,502-36,531,066
|
|
|
|
3b |
RP11-240N7 |
BES |
chr3:36,531,235-36,683,131
|
3p22.2 |
|
|
- |
|
|
|
|
OWM inv |
|
3h |
RP11-177B11 |
BES |
chr3:186,337,181-186,516,003
|
3q27.3 |
|
|
3h |
RP11-256F6 |
BES |
chr3:190,222,611-190,395,346
|
|
|
|
3h |
RP11-6E10 |
BES |
chr3:196,071,605-196,235,225
|
|
|
|
3h |
RP11-15D12 |
BES |
chr3:198,660,217-198,819,678
|
3q29 |
|
|
