DIPARTIMENTO
DI BIOLOGIA
Biology Department
Pubblicazioni su riviste ISI
Non-redundant publications in ISI journals
2011 - 2010 - 2009 - 2008 - 2007 - 2006 - Capitoli e libri
Albano F, Anelli L, Zagaria A, Archidiacono N, Liso V, Specchia G, Rocchi M: "Home-brew" FISH assay shows higher efficiency than BCR-ABL dual color, dual fusion probe in detecting microdeletions and complex rearrangements associated with t(9;22) in chronic myeloid leukemia. Cancer Genet Cytogenet 174:121-126 (2007).
Antonacci R, Vaccarelli G, Di Meo GP, Piccinni B, Miccoli MC, Cribiu EP, Perucatti A, Iannuzzi L, Ciccarese S: Molecular in situ hybridization analysis of sheep and goat BAC clones identifies the transcriptional orientation of T cell receptor gamma genes on chromosome 4 in bovids. Vet Res Commun 31:977-83 (2007).
Baldacconi R, Nonnis-Marzano C, Gaino E, Corriero G: Sexual reproduction, larval development and release in Spongia officinalis L. (Porifera, Demospongiae) from the Apulian coast. Marine Biology 152:969-979 (2007).
Barucca M, Azzini F, Bavestrello G, Biscotti MA, Calcinai B, Canapa A, Cerrano C, Olmo E: The systematic position of some boring sponges (Demospongiae, Hadromerida) studied by molecular analysis. Marine Biology 151:529-535 (2007).
Bodega B, Cardone MF, Muller S, Neusser M, Orzan F, Rossi E, Battaglioli E, Marozzi A, Riva P, Rocchi M, Meneveri R, Ginelli E: Evolutionary genomic remodelling of the human 4q subtelomere (4q35.2). BMC Evol Biol 7:39 (2007).
Bosch N, Caceres M, Cardone MF, Carreras A, Ballana E, Rocchi M, Armengol L, Estivill X: Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events. Hum Mol Genet 16:2572-82 (2007).
Calamita G, Moreno M, Ferri D, Silvestri E, Roberti P, Schiavo L, Gena P, Svelto M, Goglia F: Triiodothyronine modulates the expression of aquaporin-8 in rat liver mitochondria. Journal of Endocrinology 192:111-120 (2007).
Calcinai B, Cerrano C, Bavestrello G: Three new species and one re-description of Aka. Journal of the Marine Biological Association of the United Kingdom 87:1355-1365 (2007).
Caputi L, Andreakis N, Mastrototaro F, Cirino P, Vassillo M, Sordino P: Cryptic speciation in a model invertebrate chordate. Proc Natl Acad Sci U S A 104:9364-9369 (2007).
Cardone MF, Lomiento M, Teti MG, Misceo D, Roberto R, Capozzi O, D'Addabbo P, Ventura M, Rocchi M, Archidiacono N: Evolutionary history of chromosome 11 featuring four distinct centromere repositioning events in Catarrhini. Genomics 90:35-43 (2007).
Carreras FI, Lehmann GL, Ferri D, Tioni MF, Calamita G, Marinelli RA: Defective hepatocyte aquaporin-8 expression and reduced canalicular membrane water permeability in estrogen-induced cholestasis. Am J Physiol-Gastro Liver Physiol 292:G905-G912 (2007).
Cecere E, Petrocelli A, Perrone C: How the unattached form of Acanthophora nayadiformis (Rhodophyta : Ceramiales) produces storage and perennating organs. Journal of the Marine Biological Association of the United Kingdom 87:389-392 (2007).
Centoducati G, Tarsitano E, Bottalico A, Marvulli M, Lai OR, Crescenzo G: Monitoring of the endangered Pinna nobilis linne, 1758 in the Mar Grande of Taranto (Ionian sea, Italy). Environmental Monitoring and Assessment 131:339-347 (2007).
Cerrano C, Sambolino P, Azzini F, Calcinai B, Bavestrello G: Growth of the massive morph of Cliona nigricans (Schmidt 1862) (Porifera, Clionaidae) on different mineral substrata. Italian Journal of Zoology 74:13-19 (2007).
Consortium, Caggese C, Porcelli D, Barsanti P: Evolution of genes and genomes on the Drosophila phylogeny. Nature 450:203-218 (2007).
Corradini N, Rossi F, Giordano E, Caizzi R, Verni F, Dimitri P: Drosophila melanogaster as a model for studying protein-encoding genes that are resident in constitutive heterochromatin. Heredity 98:3-12 (2007).
Corriero G, Longo C, Mercurio M, Marchini A, Occhipinti-Ambrogi A: Porifera and bryozoa on artificial hard bottoms in the Venice Lagoon: Spatial distribution and temporal changes in the northern basin. Italian Journal of Zoology 74:21-29 (2007).
D'addabbo R, Gallo M, De Leonardis C, Sandulli R, De Zio Grimaldi S: Further studies on the marine tardigrade fauna from Sardinia (Italy). Journal of Limnology 66:56-59 (2007).
Daniela AA, De Tullio MC: Contrasting effects of increased ascorbate content on growth and development of long-day and short-day grown Brassica rapa. Caryologia 60:185 (2007).
De Gregori M, Ciccone R, Magini P, Pramparo T, Gimelli S, Messa J, Novara F, Vetro A, Rossi E, Maraschio P, Bonaglia MC, Anichini C, Ferrero GB, Silengo M, Fazzi E, Zatterale A, Fischetto R, Previdere C, Belli S, Turci A, Calabrese G, Bernardi F, Meneghelli E, Riegel M, Rocchi M, Guerneri S, Lalatta F, Zelante L, Romano C, Fichera M, Mattina T, Arrigo G, Zollino M, Giglio S, Lonardo F, Bonfante A, Ferlini A, Cifuentes F, Van Esch H, Backx L, Schinzel A, Vermeesch JR, Zuffardi O: Cryptic deletions are a common finding in "balanced" reciprocal and complex chromosome rearrangements: a study of 59 cases. J Med Genet 44:750-762 (2007).
De Tullio MC, Ciraci S, Liso R, Arrigoni O: Ascorbic acid oxidase is dynamically regulated by light and oxygen. A tool for oxygen management in plants? Journal of Plant Physiology 164:39-46 (2007).
Fanti L, Perrini B, Piacentini L, Berloco M, Marchetti E, Palumbo G, Pimpinelli S: The trithorax group and Pc group proteins are differentially involved in heterochromatin formation in Drosophila. Chromosoma (2007).
Gaino E, Baldacconi R, Corriero G: Post-larval development of the commercial sponge Spongia officinalis L. (Porifera, Demospongiae). Tissue and Cell 39:325-334 (2007).
Gallo M, D'Addabbo R, Leonardis C, Sandulli R, De Zio Grimaldi SZ: The diversity of Indian Ocean Heterotardigrada. Journal of Limnology 66:60-64 (2007).
Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, Hardison RC, Makova KD, Miller W, Milosavljevic A, Palermo RE, Siepel A, Sikela JM, Attaway T, Bell S, Bernard KE, Buhay CJ, Chandrabose MN, Dao M, Davis C, Delehaunty KD, Ding Y, Dinh HH, Dugan-Rocha S, Fulton LA, Gabisi RA, Garner TT, Godfrey J, Hawes AC, Hernandez J, Hines S, Holder M, Hume J, Jhangiani SN, Joshi V, Khan ZM, Kirkness EF, Cree A, Fowler RG, Lee S, Lewis LR, Li Z, Liu YS, Moore SM, Muzny D, Nazareth LV, Ngo DN, Okwuonu GO, Pai G, Parker D, Paul HA, Pfannkoch C, Pohl CS, Rogers YH, Ruiz SJ, Sabo A, Santibanez J, Schneider BW, Smith SM, Sodergren E, Svatek AF, Utterback TR, Vattathil S, Warren W, White CS, Chinwalla AT, Feng Y, Halpern AL, Hillier LW, Huang X, Minx P, Nelson JO, Pepin KH, Qin X, Sutton GG, Venter E, Walenz BP, Wallis JW, Worley KC, Yang SP, Jones SM, Marra MA, Rocchi M, Schein JE, Baertsch R, Clarke L, Csuros M, Glasscock J, Harris RA, Havlak P, Jackson AR, Jiang H, Liu Y, Messina DN, Shen Y, Song HX, Wylie T, Zhang L, Birney E, Han K, Konkel MK, Lee J, Smit AF, Ullmer B, Wang H, Xing J, Burhans R, Cheng Z, Karro JE, Ma J, Raney B, She X, Cox MJ, Demuth JP, Dumas LJ, Han SG, Hopkins J, Karimpour-Fard A, Kim YH, Pollack JR, Vinar T, Addo-Quaye C, Degenhardt J, Denby A, Hubisz MJ, Indap A, Kosiol C, Lahn BT, Lawson HA, Marklein A, Nielsen R, Vallender EJ, Clark AG, Ferguson B, Hernandez RD, Hirani K, Kehrer-Sawatzki H, Kolb J, Patil S, Pu LL, Ren Y, Smith DG, Wheeler DA, Schenck I, Ball EV, Chen R, Cooper DN, Giardine B, Hsu F, Kent WJ, Lesk A, Nelson DL, O'Brien W E, Prufer K, Stenson PD, Wallace JC, Ke H, Liu XM, Wang P, Xiang AP, Yang F, Barber GP, Haussler D, Karolchik D, Kern AD, Kuhn RM, Smith KE, Zwieg AS: Evolutionary and biomedical insights from the rhesus macaque genome. Science 316:222-234 (2007).
Giorda R, Ciccone R, Gimelli G, Pramparo T, Beri S, Bonaglia MC, Giglio S, Genuardi M, Argente J, Rocchi M, Zuffardi O: Two classes of low-copy repeats comediate a new recurrent rearrangement consisting of duplication at 8p23.1 and triplication at 8p23.2. Hum Mutat 28:459-468 (2007).
Grano A, De Tullio MC: Ascorbic acid as a sensor of oxidative stress and a regulator of gene expression: The Yin and Yang of vitamin C. Medical Hypotheses 69:953-954 (2007).
Jiang Z, Tang H, Ventura M, Cardone MF, Marques-Bonet T, She X, Pevzner PA, Eichler EE: Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution. Nat Genet 39:1361-1368 (2007).
Liquori GE, Mastrodonato M, Zizza S, Ferri D: Glycoconjugate histochemistry of the digestive tract of Triturus carnifex (Amphibia, Caudata). Journal of Molecular Histology 38:191-199 (2007).
Longo C, Mastrototaro F, Corriero G: Occurrence of Paraleucilla magna (Porifera: Calcarea) in the Mediterranean Sea. Journal of the Marine Biological Association of the United Kingdom 87:1749-1755 (2007).
Marques-Bonet T, Sanchez-Ruiz J, Armengol L, Khaja R, Bertranpetit J, Rocchi M, Gazave E, Lopez-Bigas N, Navarro A: On the association between chromosomal rearrangements and genic evolution in humans and chimpanzees. Genome Biol 8:R230 (2007).
Mastrototaro F, Carlucci R, Capezzuto F, Sion L: First record of dwarf flathead Elates ransonnetii (Platycephalidae) in the Mediterranean Sea (North-Western Ionian Sea). Cybium 31:393-394 (2007).
Mefford HC, Clauin S, Sharp AJ, Moller RS, Ullmann R, Kapur R, Pinkel D, Cooper GM, Ventura M, Ropers HH, Tommerup N, Eichler EE, Bellanne-Chantelot C: Recurrent reciprocal genomic rearrangements of 17q12 are associated with renal disease, diabetes, and epilepsy. Am J Hum Genet 81:1057-69 (2007).
Mercurio M, Corriero G, Gaino E: A 3-year investigation of sexual reproduction in Geodia cydonium (Jameson 1811) (Porifera, Demospongiae) from a semi-enclosed Mediterranean bay. Marine Biology 151:1491-1500 (2007).
Minervini CF, Marsano RM, Casieri P, Fanti L, Caizzi R, Pimpinelli S, Rocchi M, Viggiano L: Heterochromatin protein 1 interacts with 5'UTR of transposable element ZAM in a sequence-specific fashion. Gene 393:1-10 (2007).
Mona S, Randi E, Tommaseo-Ponzetta M: Evolutionary history of the genus Sus inferred from cytochrome b sequences. Molecular Phylogenetics and Evolution 45:757-762 (2007a).
Mona S, Tommaseo-Ponzetta M, Brauer S, Sudoyo H, Marzuki S, Kayser M: Patterns of Y-chromosome diversity intersect with the trans-New Guinea hypothesis. Molecular biology and evolution 24:2546-2555 (2007b).
Montemurro F, Convertini G, Ferri D: Nitrogen application in winter wheat grown in Mediterranean conditions: Effects on nitrogen uptake, utilization efficiency, and soil nitrogen deficit. Journal of Plant Nutrition 30:1681-1703 (2007a).
Montemurro F, Ferri D, Convertini G, Maiorana M: Treated and untreated olive waste water application on ryegrass meadow: Chemical soil properties and yielding responses. Agrochimica 51:148-159 (2007b).
Montemurro F, Maiorana M, Convertini G, Ferri D: Alternative sugar beet production using shallow tillage and municipal solid waste fertiliser. Agronomy for Sustainable Development 27:129-137 (2007c).
Montemurro F, Maiorana M, Convertini G, Ferri D: Effect of different N fertilisation strategies on yield, plant N status, N uptake and soil characteristics in a maize-barley rotation. Agrochimica 51:40-54 (2007d).
Nonnis Marzano C, Baldacconi R, Fianchini A, Gravina F, Corriero G: Settlement seasonality and temporal changes in hard substrate macrozoobenthic communities of Lesina Lagoon (Apulia, Southern Adriatic Sea). Chemistry and Ecology 23:479-491 (2007).
Paola IM, Paciolla C, D'Aquino L, Morgana M, Tommasi F: Effect of rare earth elements on growth and antioxidant metabolism in Lemna minor L. Caryologia 60:125-128 (2007).
Petrosillo G, Portincasa P, Grattagliano I, Casanova G, Matera M, Ruggiero FM, Ferri D, Paradies G: Mitochondrial dysfunction in rat with nonalcoholic fatty liver. Involvement of complex I, reactive oxygen species and cardiolipin. Biochimica et Biophysica Acta - Bioenergetics 1767:1260-1267 (2007).
Porcelli D, Barsanti P, Pesole G, Caggese C: The nuclear OXPHOS genes in insecta: a common evolutionary origin, a common cis-regulatory motif, a common destiny for gene duplicates. BMC Evol Biol 7:215 (2007).
Roberto R, Capozzi O, Wilson RK, Mardis ER, Lomiento M, Tuzun E, Cheng Z, Mootnick AR, Archidiacono N, Rocchi M, Eichler EE: Molecular refinement of gibbon genome rearrangement. Genome Res 17:249-257 (2007).
Rossi F, Moschetti R, Caizzi R, Corradini N, Dimitri P: Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Genetics 175:595-607 (2007).
Scillitani G, Zizza S, Liquori GE, Ferri D: Lectin histochemistry of gastrointestinal glycoconjugates in the greater horseshoe bat, Rhinolophus ferrumequinum (Schreber, 1774). Acta Histochemica 109:347-357 (2007).
Scinto A, Benvenuto C, Cerrano C, Mori M: Seasonal cycle of Jassa marmorata Holmes, 1903 (Amphipoda) in the Ligurian Sea (Mediterranean, Italy). Journal of Crustacean Biology 27:212-216 (2007).
Steindler L, Schuster S, Ilan M, Avni A, Cerrano C, Beer S: Differential gene expression in a marine sponge in relation to its symbiotic state. Marine Biotechnology 9:543-549 (2007).
Storlazzi CT, Albano F, Dencic-Fekete M, Djordjevic V, Rocchi M: Late-appearing pseudocentric fission event during chronic myeloid leukemia progression. Cancer Genet Cytogenet 174:61-67 (2007a).
Storlazzi CT, Albano F, Lo Cunsolo C, Doglioni C, Guastadisegni MC, Impera L, Lonoce A, Funes S, Macri E, Iuzzolino P, Panagopoulos I, Specchia G, Rocchi M: Upregulation of the SOX5 by promoter swapping with the P2RY8 gene in primary splenic follicular lymphoma. Leukemia 17:2221-2225 (2007b).
Vacca RA, Valenti D, Bobba A, de Pinto MC, Merafina RS, De Gara L, Passarella S, Marra E: Proteasome function is required for activation of programmed cell death in heat shocked tobacco Bright-Yellow 2 cells. FEBS Letters 581:917-22 (2007).
Valente L, Tiranti V, Marsano RM, Malfatti E, Fernandez-Vizarra E, Donnini C, Mereghetti P, De Gioia L, Burlina A, Castellan C, Comi GP, Savasta S, Ferrero I, Zeviani M: Infantile encephalopathy and defective mitochondrial DNA translation in patients with mutations of mitochondrial elongation factors EFG1 and EFTu. Am J Hum Genet 80:44-58 (2007).
Valenti D, Vacca RA, de Pinto MC, De Gara L, Marra E, Passarella S: In the early phase of programmed cell death in Tobacco Bright Yellow 2 cells the mitochondrial adenine nucleotide translocator, adenylate kinase and nucleoside diphosphate kinase are impaired in a reactive oxygen species-dependent manner. Biochim Biophys Acta 1767:66-78 (2007).
Valisano L, Bavestrello G, Giovine M, Arillo A, Cerrano C: Effect of iron and dissolved silica on primmorphs of Petrosia ficiformis (Poiret, 1789). Chemistry and Ecology 23:233-241 (2007).
Ventura M, Antonacci F, Cardone MF, Stanyon R, D'Addabbo P, Cellamare A, Sprague LJ, Eichler EE, Archidiacono N, Rocchi M: Evolutionary formation of new centromeres in macaque. Science 316:243-246 (2007).